Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL353732.1-201ENST00000569618 1459 ntBASIC14.1□□□□□ -0.15
CSMD2Q7Z408 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 AC015936.2-201ENST00000593177 259 ntBASIC14.1□□□□□ -0.15
CSMD2Q7Z408 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 LYSMD4-203ENST00000378904 2122 ntBASIC14.1□□□□□ -0.15
CSMD2Q7Z408 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD2Q7Z408 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 FXNP2-201ENST00000411625 547 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 GOLGA2P4-201ENST00000441462 777 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC108725.1-201ENST00000495472 409 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 CSF2RBP1-201ENST00000447905 391 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AL671710.1-201ENST00000610245 2349 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC098818.2-201ENST00000564925 2320 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 AC131009.4-201ENST00000624048 1740 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.09□□□□□ -0.15
CSMD2Q7Z408 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD2Q7Z408 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD2Q7Z408 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AC073389.1-201ENST00000595595 795 ntBASIC14.08□□□□□ -0.16
CSMD2Q7Z408 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AC104989.1-201ENST00000519711 778 ntBASIC14.08□□□□□ -0.16
CSMD2Q7Z408 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
CSMD2Q7Z408 AL035456.1-201ENST00000456064 1369 ntBASIC14.08□□□□□ -0.16
CSMD2Q7Z408 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms