Protein–RNA interactions for Protein: Q7RTZ2

USP17L1, Ubiquitin carboxyl-terminal hydrolase 17-like protein 1, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L1Q7RTZ2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 GAPDHP21-201ENST00000450301 1010 ntBASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 AC004890.2-204ENST00000481968 304 ntBASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.33■□□□□ 0.85
USP17L1Q7RTZ2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
USP17L1Q7RTZ2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
USP17L1Q7RTZ2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.33■□□□□ 0.84
USP17L1Q7RTZ2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.33■□□□□ 0.84
USP17L1Q7RTZ2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L1Q7RTZ2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP17L1Q7RTZ2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
USP17L1Q7RTZ2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.29■□□□□ 0.84
USP17L1Q7RTZ2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms