Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 AC092384.3-202ENST00000564646 2873 ntBASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 LINC00304-203ENST00000565008 1864 ntBASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 GUSBP12-201ENST00000513727 720 ntBASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 RN7SL510P-201ENST00000581311 263 ntBASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.59■□□□□ 0.73
PDZRN4Q6ZMN7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDZRN4Q6ZMN7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 MIR149-201ENST00000384879 89 ntBASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 AL592071.1-201ENST00000611956 408 ntBASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDZRN4Q6ZMN7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 AL353692.3-201ENST00000407031 1396 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 AC004870.1-201ENST00000315132 882 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 TSPY19P-201ENST00000418461 509 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 TSPY18P-201ENST00000441642 509 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 RN7SL606P-201ENST00000472779 293 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 AC104819.1-201ENST00000504587 486 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 AL121772.3-201ENST00000610840 674 ntBASIC19.57■□□□□ 0.72
PDZRN4Q6ZMN7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms