Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 LINC02199-201ENST00000506655 2702 ntBASIC19.12■□□□□ 0.65
SHC4Q6S5L8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 TOP3BP1-201ENST00000420768 1380 ntBASIC19.12■□□□□ 0.65
SHC4Q6S5L8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 AC021087.4-201ENST00000563761 564 ntBASIC19.12■□□□□ 0.65
SHC4Q6S5L8 PRELID1P1-202ENST00000567272 903 ntBASIC19.12■□□□□ 0.65
SHC4Q6S5L8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 REXO1L3P-201ENST00000622202 1288 ntBASIC19.12■□□□□ 0.65
SHC4Q6S5L8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC4Q6S5L8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 AC006504.4-201ENST00000592118 1568 ntBASIC19.11■□□□□ 0.65
SHC4Q6S5L8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 AC002310.6-201ENST00000624451 1377 ntBASIC19.11■□□□□ 0.65
SHC4Q6S5L8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 AC087163.2-201ENST00000457299 853 ntBASIC19.11■□□□□ 0.65
SHC4Q6S5L8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC4Q6S5L8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 ME2P1-201ENST00000426028 1970 ntBASIC19.1■□□□□ 0.65
SHC4Q6S5L8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 ELK2BP-201ENST00000415014 1224 ntBASIC19.1■□□□□ 0.65
SHC4Q6S5L8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 AL139011.1-202ENST00000642063 584 ntBASIC19.1■□□□□ 0.65
SHC4Q6S5L8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms