Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SNHG9-202ENST00000564014 471 ntBASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 PCDHA12-202ENST00000613593 2588 ntBASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AC092919.2-201ENST00000623631 1645 ntBASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AC112191.1-201ENST00000523689 701 ntBASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AL596442.2-201ENST00000610240 980 ntBASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 AC008894.3-201ENST00000624324 3103 ntBASIC15.66■□□□□ 0.1
H3F3CQ6NXT2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 AL121761.2-201ENST00000598007 1648 ntBASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 AC002056.1-201ENST00000395613 760 ntBASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 PMS2P2-201ENST00000425039 1128 ntBASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 CNN2P11-201ENST00000429351 262 ntBASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 AP000344.2-201ENST00000512987 629 ntBASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
H3F3CQ6NXT2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms