Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTL6Q6ICC9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTL6Q6ICC9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RTL6Q6ICC9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTL6Q6ICC9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
RTL6Q6ICC9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTL6Q6ICC9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTL6Q6ICC9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTL6Q6ICC9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTL6Q6ICC9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 HMGN1P19-201ENST00000436976 333 ntBASIC15.33■□□□□ 0.04
RTL6Q6ICC9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 PAWRP1-201ENST00000451083 565 ntBASIC15.33■□□□□ 0.04
RTL6Q6ICC9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 AC007064.4-201ENST00000637740 555 ntBASIC15.33■□□□□ 0.04
RTL6Q6ICC9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RTL6Q6ICC9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 AL121761.2-201ENST00000598007 1648 ntBASIC15.32■□□□□ 0.04
RTL6Q6ICC9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 LINC00304-203ENST00000565008 1864 ntBASIC15.32■□□□□ 0.04
RTL6Q6ICC9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 FAM185BP-201ENST00000443595 716 ntBASIC15.32■□□□□ 0.04
RTL6Q6ICC9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 AC108860.2-201ENST00000562760 2183 ntBASIC15.32■□□□□ 0.04
RTL6Q6ICC9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTL6Q6ICC9 AC133963.1-201ENST00000504166 1679 ntBASIC15.32■□□□□ 0.04
RTL6Q6ICC9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 CNN2P11-201ENST00000429351 262 ntBASIC15.31■□□□□ 0.04
RTL6Q6ICC9 FAM58CP-201ENST00000435741 640 ntBASIC15.31■□□□□ 0.04
RTL6Q6ICC9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 METTL21AP1-201ENST00000438852 635 ntBASIC15.31■□□□□ 0.04
RTL6Q6ICC9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 SLC25A6P2-201ENST00000497974 877 ntBASIC15.31■□□□□ 0.04
RTL6Q6ICC9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 ACTL9-202ENST00000612068 1252 ntBASIC15.31■□□□□ 0.04
RTL6Q6ICC9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms