Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 GUSBP12-201ENST00000513727 720 ntBASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 AC010203.1-204ENST00000548782 407 ntBASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 RNF126P1-202ENST00000569893 925 ntBASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 AL138831.2-201ENST00000606564 490 ntBASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00242Q5T6M2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AC024909.3-201ENST00000611513 2257 ntBASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AC006538.1-201ENST00000567905 1585 ntBASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 YBX1P2-201ENST00000489612 999 ntBASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 AC073912.3-201ENST00000624414 853 ntBASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms