Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 NKILA-202ENST00000614771 2598 ntBASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 AC108751.1-201ENST00000490852 363 ntBASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDLRAP1Q5SW96 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 FRMD8P1-201ENST00000440433 1524 ntBASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 MRPL20P1-201ENST00000400819 433 ntBASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 AC108073.2-201ENST00000464002 357 ntBASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 RPL13AP23-201ENST00000480739 586 ntBASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 AC145285.3-201ENST00000564603 959 ntBASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 Z83851.2-201ENST00000609564 659 ntBASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.91■□□□□ 0.3
LDLRAP1Q5SW96 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 UBALD1-205ENST00000590891 2641 ntBASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 AC009947.1-201ENST00000444350 727 ntBASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms