Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 PCDHB17P-201ENST00000539533 2393 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 LINC00895-201ENST00000629028 1637 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 MIR1233-2-201ENST00000408138 82 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 MIR1233-1-201ENST00000408722 82 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 FAM58CP-201ENST00000435741 640 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AC091812.2-201ENST00000619081 385 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AC139530.3-201ENST00000620344 690 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AP001350.2-201ENST00000625104 1094 ntBASIC15.99■□□□□ 0.15
PRTGQ2VWP7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.99■□□□□ 0.15
PRTGQ2VWP7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 AC006277.1-201ENST00000624348 1610 ntBASIC15.98■□□□□ 0.15
PRTGQ2VWP7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.98■□□□□ 0.15
PRTGQ2VWP7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.98■□□□□ 0.15
PRTGQ2VWP7 AC055717.3-201ENST00000622967 595 ntBASIC15.98■□□□□ 0.15
PRTGQ2VWP7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 AC092902.6-201ENST00000641783 218 ntBASIC15.98■□□□□ 0.15
PRTGQ2VWP7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.98■□□□□ 0.15
PRTGQ2VWP7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 GPALPP1-207ENST00000611650 899 ntBASIC15.97■□□□□ 0.15
PRTGQ2VWP7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRTGQ2VWP7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms