Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AL079307.3-201ENST00000556114 283 ntBASIC20.85■□□□□ 0.93
DDR1Q08345 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.85■□□□□ 0.93
DDR1Q08345 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.85■□□□□ 0.93
DDR1Q08345 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.85■□□□□ 0.93
DDR1Q08345 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.85■□□□□ 0.93
DDR1Q08345 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDR1Q08345 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDR1Q08345 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 ABALON-201ENST00000629058 1903 ntBASIC20.84■□□□□ 0.93
DDR1Q08345 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.84■□□□□ 0.93
DDR1Q08345 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
DDR1Q08345 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.84■□□□□ 0.93
DDR1Q08345 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.84■□□□□ 0.93
DDR1Q08345 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.84■□□□□ 0.93
DDR1Q08345 SPTSSB-204ENST00000617024 1292 ntBASIC20.84■□□□□ 0.93
DDR1Q08345 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
DDR1Q08345 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.84■□□□□ 0.93
DDR1Q08345 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DDR1Q08345 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.84■□□□□ 0.93
DDR1Q08345 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 AC073439.1-201ENST00000624121 1774 ntBASIC20.84■□□□□ 0.93
DDR1Q08345 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDR1Q08345 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.84■□□□□ 0.93
DDR1Q08345 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
DDR1Q08345 FRMD8P1-201ENST00000440433 1524 ntBASIC20.83■□□□□ 0.93
DDR1Q08345 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.83■□□□□ 0.93
DDR1Q08345 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.83■□□□□ 0.93
DDR1Q08345 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.83■□□□□ 0.93
DDR1Q08345 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
DDR1Q08345 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 SPDYE19P-201ENST00000338590 713 ntBASIC20.83■□□□□ 0.93
DDR1Q08345 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
DDR1Q08345 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DDR1Q08345 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.83■□□□□ 0.93
DDR1Q08345 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.83■□□□□ 0.93
DDR1Q08345 AL512361.1-201ENST00000554200 418 ntBASIC20.83■□□□□ 0.93
DDR1Q08345 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
DDR1Q08345 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.83■□□□□ 0.93
DDR1Q08345 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDR1Q08345 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDR1Q08345 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DDR1Q08345 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDR1Q08345 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
DDR1Q08345 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DDR1Q08345 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDR1Q08345 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.82■□□□□ 0.92
DDR1Q08345 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.82■□□□□ 0.92
DDR1Q08345 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.82■□□□□ 0.92
DDR1Q08345 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 MIR658-201ENST00000385210 100 ntBASIC20.82■□□□□ 0.92
DDR1Q08345 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 KRT17P8-201ENST00000540749 863 ntBASIC20.82■□□□□ 0.92
DDR1Q08345 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 AL606495.2-201ENST00000605867 535 ntBASIC20.82■□□□□ 0.92
DDR1Q08345 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.82■□□□□ 0.92
DDR1Q08345 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DDR1Q08345 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDR1Q08345 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.82■□□□□ 0.92
DDR1Q08345 BTBD7P1-201ENST00000447253 1453 ntBASIC20.81■□□□□ 0.92
DDR1Q08345 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDR1Q08345 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDR1Q08345 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.81■□□□□ 0.92
DDR1Q08345 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
DDR1Q08345 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.81■□□□□ 0.92
DDR1Q08345 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.81■□□□□ 0.92
DDR1Q08345 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDR1Q08345 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms