Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GABPAQ06546 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GABPAQ06546 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GABPAQ06546 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.79■□□□□ 0.76
GABPAQ06546 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GABPAQ06546 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.79■□□□□ 0.76
GABPAQ06546 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.79■□□□□ 0.76
GABPAQ06546 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.79■□□□□ 0.76
GABPAQ06546 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.79■□□□□ 0.76
GABPAQ06546 AC004449.1-201ENST00000564240 433 ntBASIC19.79■□□□□ 0.76
GABPAQ06546 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.79■□□□□ 0.76
GABPAQ06546 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GABPAQ06546 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GABPAQ06546 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABPAQ06546 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.79■□□□□ 0.76
GABPAQ06546 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GABPAQ06546 TUBB8P12-201ENST00000308911 1335 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 TUBB7P-202ENST00000428444 1305 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 TUBB8P7-204ENST00000567960 1332 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 AC016027.1-202ENST00000607927 1699 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.78■□□□□ 0.76
GABPAQ06546 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
GABPAQ06546 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.78■□□□□ 0.76
GABPAQ06546 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.78■□□□□ 0.76
GABPAQ06546 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.78■□□□□ 0.76
GABPAQ06546 AL512356.2-201ENST00000546955 174 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 KRT8P23-201ENST00000560090 1207 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.78■□□□□ 0.76
GABPAQ06546 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.78■□□□□ 0.76
GABPAQ06546 AC013467.2-201ENST00000605472 835 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GABPAQ06546 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GABPAQ06546 AC139713.2-201ENST00000641328 2723 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABPAQ06546 AC092068.3-201ENST00000587894 2016 ntBASIC19.78■□□□□ 0.76
GABPAQ06546 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
GABPAQ06546 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 MIR346-201ENST00000362234 95 ntBASIC19.77■□□□□ 0.76
GABPAQ06546 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.77■□□□□ 0.76
GABPAQ06546 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.77■□□□□ 0.76
GABPAQ06546 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 AC025678.2-201ENST00000562061 970 ntBASIC19.77■□□□□ 0.76
GABPAQ06546 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.77■□□□□ 0.76
GABPAQ06546 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
GABPAQ06546 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
GABPAQ06546 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.77■□□□□ 0.76
GABPAQ06546 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.77■□□□□ 0.76
GABPAQ06546 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.77■□□□□ 0.76
GABPAQ06546 SNX33P1-201ENST00000592116 1762 ntBASIC19.77■□□□□ 0.76
GABPAQ06546 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABPAQ06546 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
GABPAQ06546 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GABPAQ06546 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
GABPAQ06546 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
GABPAQ06546 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms