Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3P56703 SAPCD2P3-201ENST00000455031 850 ntBASIC16.06■□□□□ 0.16
WNT3P56703 AC106795.1-205ENST00000512851 1056 ntBASIC16.06■□□□□ 0.16
WNT3P56703 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3P56703 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.06■□□□□ 0.16
WNT3P56703 AC064862.7-201ENST00000604520 867 ntBASIC16.06■□□□□ 0.16
WNT3P56703 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
WNT3P56703 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 AL391005.1-201ENST00000623953 2435 ntBASIC16.06■□□□□ 0.16
WNT3P56703 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
WNT3P56703 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
WNT3P56703 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3P56703 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
WNT3P56703 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
WNT3P56703 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3P56703 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 AC092364.2-201ENST00000596710 2692 ntBASIC16.05■□□□□ 0.16
WNT3P56703 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3P56703 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 KRT8P49-201ENST00000604166 1432 ntBASIC16.05■□□□□ 0.16
WNT3P56703 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 AL021920.2-201ENST00000624828 1351 ntBASIC16.05■□□□□ 0.16
WNT3P56703 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
WNT3P56703 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
WNT3P56703 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3P56703 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3P56703 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3P56703 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3P56703 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
WNT3P56703 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3P56703 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.04■□□□□ 0.16
WNT3P56703 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.04■□□□□ 0.16
WNT3P56703 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.04■□□□□ 0.16
WNT3P56703 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 NKAPP1-205ENST00000585790 367 ntBASIC16.04■□□□□ 0.16
WNT3P56703 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 AC006538.1-201ENST00000567905 1585 ntBASIC16.04■□□□□ 0.16
WNT3P56703 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3P56703 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3P56703 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
WNT3P56703 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms