Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SUMO3P55854 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.34■□□□□ 0.05
SUMO3P55854 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.34■□□□□ 0.05
SUMO3P55854 AC034105.1-201ENST00000563488 319 ntBASIC15.34■□□□□ 0.05
SUMO3P55854 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.34■□□□□ 0.05
SUMO3P55854 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.34■□□□□ 0.05
SUMO3P55854 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SUMO3P55854 AC120114.3-201ENST00000611923 658 ntBASIC15.34■□□□□ 0.05
SUMO3P55854 ACTL9-202ENST00000612068 1252 ntBASIC15.34■□□□□ 0.05
SUMO3P55854 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.34■□□□□ 0.05
SUMO3P55854 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.34■□□□□ 0.05
SUMO3P55854 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SUMO3P55854 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SUMO3P55854 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
SUMO3P55854 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SUMO3P55854 AC106820.2-201ENST00000563775 3264 ntBASIC15.34■□□□□ 0.05
SUMO3P55854 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SUMO3P55854 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SUMO3P55854 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.33■□□□□ 0.05
SUMO3P55854 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SUMO3P55854 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SUMO3P55854 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.33■□□□□ 0.05
SUMO3P55854 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.33■□□□□ 0.05
SUMO3P55854 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SUMO3P55854 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SUMO3P55854 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.33■□□□□ 0.04
SUMO3P55854 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.33■□□□□ 0.04
SUMO3P55854 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 AC096734.2-201ENST00000562054 433 ntBASIC15.33■□□□□ 0.04
SUMO3P55854 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.33■□□□□ 0.04
SUMO3P55854 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.33■□□□□ 0.04
SUMO3P55854 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 AL645728.2-201ENST00000641974 660 ntBASIC15.33■□□□□ 0.04
SUMO3P55854 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.33■□□□□ 0.04
SUMO3P55854 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SUMO3P55854 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SUMO3P55854 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 AC012313.1-201ENST00000593393 3059 ntBASIC15.32■□□□□ 0.04
SUMO3P55854 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SUMO3P55854 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.32■□□□□ 0.04
SUMO3P55854 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.32■□□□□ 0.04
SUMO3P55854 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.32■□□□□ 0.04
SUMO3P55854 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
SUMO3P55854 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SUMO3P55854 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.32■□□□□ 0.04
SUMO3P55854 IGLL3P-201ENST00000412472 434 ntBASIC15.32■□□□□ 0.04
SUMO3P55854 AL591424.1-201ENST00000442569 1213 ntBASIC15.32■□□□□ 0.04
SUMO3P55854 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms