Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 U91328.1-201ENST00000437528 223 ntBASIC16.73■□□□□ 0.27
LIMK1P53667 AC002558.1-201ENST00000488906 803 ntBASIC16.73■□□□□ 0.27
LIMK1P53667 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 IGHV3-71-201ENST00000523324 359 ntBASIC16.73■□□□□ 0.27
LIMK1P53667 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK1P53667 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.73■□□□□ 0.27
LIMK1P53667 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.73■□□□□ 0.27
LIMK1P53667 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK1P53667 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LIMK1P53667 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK1P53667 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK1P53667 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK1P53667 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LIMK1P53667 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
LIMK1P53667 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK1P53667 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LIMK1P53667 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK1P53667 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK1P53667 MRPS18AP1-201ENST00000414458 589 ntBASIC16.72■□□□□ 0.27
LIMK1P53667 AC245100.3-201ENST00000441281 285 ntBASIC16.72■□□□□ 0.27
LIMK1P53667 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK1P53667 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.72■□□□□ 0.27
LIMK1P53667 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK1P53667 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.72■□□□□ 0.27
LIMK1P53667 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.72■□□□□ 0.27
LIMK1P53667 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LIMK1P53667 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK1P53667 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK1P53667 AC004233.3-201ENST00000607794 1269 ntBASIC16.72■□□□□ 0.27
LIMK1P53667 AC116407.2-201ENST00000613639 860 ntBASIC16.72■□□□□ 0.27
LIMK1P53667 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LIMK1P53667 MIR6080-201ENST00000617359 66 ntBASIC16.72■□□□□ 0.27
LIMK1P53667 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.72■□□□□ 0.27
LIMK1P53667 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK1P53667 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK1P53667 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK1P53667 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.71■□□□□ 0.27
LIMK1P53667 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.27
LIMK1P53667 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.71■□□□□ 0.27
LIMK1P53667 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.71■□□□□ 0.27
LIMK1P53667 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.71■□□□□ 0.27
LIMK1P53667 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.71■□□□□ 0.27
LIMK1P53667 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.71■□□□□ 0.27
LIMK1P53667 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK1P53667 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LIMK1P53667 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.71■□□□□ 0.27
LIMK1P53667 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
LIMK1P53667 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LIMK1P53667 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
LIMK1P53667 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
LIMK1P53667 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 UXT-AS1-201ENST00000590504 1525 ntBASIC16.7■□□□□ 0.26
LIMK1P53667 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LIMK1P53667 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK1P53667 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LIMK1P53667 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK1P53667 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK1P53667 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK1P53667 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms