Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 AC093525.9-201ENST00000624961 1746 ntBASIC18.54■□□□□ 0.56
ACLYP53396 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
ACLYP53396 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.54■□□□□ 0.56
ACLYP53396 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.53■□□□□ 0.56
ACLYP53396 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.53■□□□□ 0.56
ACLYP53396 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.53■□□□□ 0.56
ACLYP53396 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.53■□□□□ 0.56
ACLYP53396 U91328.1-201ENST00000437528 223 ntBASIC18.53■□□□□ 0.56
ACLYP53396 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ACLYP53396 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.53■□□□□ 0.56
ACLYP53396 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.53■□□□□ 0.56
ACLYP53396 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 AL132655.2-201ENST00000596276 594 ntBASIC18.53■□□□□ 0.56
ACLYP53396 AL844908.2-201ENST00000609461 460 ntBASIC18.53■□□□□ 0.56
ACLYP53396 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.53■□□□□ 0.56
ACLYP53396 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ACLYP53396 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.53■□□□□ 0.56
ACLYP53396 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACLYP53396 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ACLYP53396 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ACLYP53396 CETN4P-206ENST00000642099 2168 ntBASIC18.52■□□□□ 0.56
ACLYP53396 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.52■□□□□ 0.56
ACLYP53396 RPL37AP1-201ENST00000412502 279 ntBASIC18.52■□□□□ 0.56
ACLYP53396 AL353779.1-201ENST00000434793 351 ntBASIC18.52■□□□□ 0.56
ACLYP53396 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 MTND6P24-201ENST00000440466 518 ntBASIC18.52■□□□□ 0.56
ACLYP53396 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.52■□□□□ 0.56
ACLYP53396 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.52■□□□□ 0.56
ACLYP53396 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.52■□□□□ 0.56
ACLYP53396 API5-211ENST00000534695 560 ntTSL 5 BASIC18.52■□□□□ 0.56
ACLYP53396 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.52■□□□□ 0.56
ACLYP53396 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.52■□□□□ 0.56
ACLYP53396 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.52■□□□□ 0.56
ACLYP53396 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.52■□□□□ 0.56
ACLYP53396 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.52■□□□□ 0.56
ACLYP53396 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACLYP53396 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ACLYP53396 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ACLYP53396 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.52■□□□□ 0.55
ACLYP53396 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ACLYP53396 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.52■□□□□ 0.55
ACLYP53396 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.52■□□□□ 0.55
ACLYP53396 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.51■□□□□ 0.55
ACLYP53396 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.51■□□□□ 0.55
ACLYP53396 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ACLYP53396 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ACLYP53396 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 SLC25A6P5-201ENST00000435663 894 ntBASIC18.51■□□□□ 0.55
ACLYP53396 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.51■□□□□ 0.55
ACLYP53396 AC140912.1-201ENST00000577171 1054 ntBASIC18.51■□□□□ 0.55
ACLYP53396 AL589739.1-201ENST00000607720 493 ntBASIC18.51■□□□□ 0.55
ACLYP53396 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.51■□□□□ 0.55
ACLYP53396 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ACLYP53396 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.51■□□□□ 0.55
ACLYP53396 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.51■□□□□ 0.55
ACLYP53396 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ACLYP53396 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACLYP53396 AC138969.3-201ENST00000546612 1459 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms