Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLCN2P51788 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN2P51788 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN2P51788 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLCN2P51788 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCN2P51788 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCN2P51788 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 AC132008.2-207ENST00000454517 770 ntBASIC16.49■□□□□ 0.23
CLCN2P51788 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.49■□□□□ 0.23
CLCN2P51788 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCN2P51788 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CLCN2P51788 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
CLCN2P51788 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 AC024909.3-201ENST00000611513 2257 ntBASIC16.49■□□□□ 0.23
CLCN2P51788 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLCN2P51788 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.49■□□□□ 0.23
CLCN2P51788 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN2P51788 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN2P51788 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLCN2P51788 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLCN2P51788 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
CLCN2P51788 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN2P51788 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN2P51788 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CLCN2P51788 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN2P51788 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN2P51788 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN2P51788 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCN2P51788 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN2P51788 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms