Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.84■□□□□ 0.77
MRE11P49959 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MRE11P49959 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.84■□□□□ 0.77
MRE11P49959 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MRE11P49959 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
MRE11P49959 MIR1233-2-201ENST00000408138 82 ntBASIC19.84■□□□□ 0.77
MRE11P49959 MIR1233-1-201ENST00000408722 82 ntBASIC19.84■□□□□ 0.77
MRE11P49959 AC009065.1-201ENST00000564055 1225 ntBASIC19.84■□□□□ 0.77
MRE11P49959 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRE11P49959 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRE11P49959 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.83■□□□□ 0.77
MRE11P49959 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
MRE11P49959 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRE11P49959 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.83■□□□□ 0.77
MRE11P49959 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MRE11P49959 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRE11P49959 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRE11P49959 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
MRE11P49959 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRE11P49959 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.83■□□□□ 0.77
MRE11P49959 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
MRE11P49959 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.83■□□□□ 0.77
MRE11P49959 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRE11P49959 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
MRE11P49959 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.83■□□□□ 0.77
MRE11P49959 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.83■□□□□ 0.77
MRE11P49959 AL355385.1-201ENST00000606123 409 ntBASIC19.83■□□□□ 0.77
MRE11P49959 AL031008.1-201ENST00000619963 541 ntBASIC19.83■□□□□ 0.77
MRE11P49959 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.83■□□□□ 0.77
MRE11P49959 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRE11P49959 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRE11P49959 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRE11P49959 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MRE11P49959 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MRE11P49959 MTHFR-217ENST00000641820 1569 ntBASIC19.83■□□□□ 0.76
MRE11P49959 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.82■□□□□ 0.76
MRE11P49959 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.82■□□□□ 0.76
MRE11P49959 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.82■□□□□ 0.76
MRE11P49959 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
MRE11P49959 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.82■□□□□ 0.76
MRE11P49959 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.82■□□□□ 0.76
MRE11P49959 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
MRE11P49959 NPAP1P7-201ENST00000613027 823 ntBASIC19.82■□□□□ 0.76
MRE11P49959 AC116562.4-202ENST00000641738 218 ntBASIC19.82■□□□□ 0.76
MRE11P49959 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.82■□□□□ 0.76
MRE11P49959 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MRE11P49959 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.82■□□□□ 0.76
MRE11P49959 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.82■□□□□ 0.76
MRE11P49959 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRE11P49959 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.81■□□□□ 0.76
MRE11P49959 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.81■□□□□ 0.76
MRE11P49959 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.81■□□□□ 0.76
MRE11P49959 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.81■□□□□ 0.76
MRE11P49959 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.81■□□□□ 0.76
MRE11P49959 AL160237.2-201ENST00000556165 472 ntBASIC19.81■□□□□ 0.76
MRE11P49959 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 KRT8P7-201ENST00000533003 1432 ntBASIC19.81■□□□□ 0.76
MRE11P49959 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.81■□□□□ 0.76
MRE11P49959 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.81■□□□□ 0.76
MRE11P49959 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MRE11P49959 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.81■□□□□ 0.76
MRE11P49959 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
MRE11P49959 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.81■□□□□ 0.76
MRE11P49959 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRE11P49959 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms