Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.5■□□□□ 0.55
CASP4P49662 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.5■□□□□ 0.55
CASP4P49662 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.5■□□□□ 0.55
CASP4P49662 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASP4P49662 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CASP4P49662 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CASP4P49662 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASP4P49662 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.5■□□□□ 0.55
CASP4P49662 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.5■□□□□ 0.55
CASP4P49662 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASP4P49662 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASP4P49662 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CASP4P49662 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CASP4P49662 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.49■□□□□ 0.55
CASP4P49662 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.49■□□□□ 0.55
CASP4P49662 OR7E47P-204ENST00000575924 449 ntBASIC18.49■□□□□ 0.55
CASP4P49662 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.49■□□□□ 0.55
CASP4P49662 MIR1199-201ENST00000621445 119 ntBASIC18.49■□□□□ 0.55
CASP4P49662 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.49■□□□□ 0.55
CASP4P49662 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASP4P49662 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CASP4P49662 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CASP4P49662 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
CASP4P49662 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.48■□□□□ 0.55
CASP4P49662 AC107918.2-201ENST00000530817 355 ntBASIC18.48■□□□□ 0.55
CASP4P49662 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.48■□□□□ 0.55
CASP4P49662 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.48■□□□□ 0.55
CASP4P49662 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.48■□□□□ 0.55
CASP4P49662 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CASP4P49662 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CASP4P49662 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.48■□□□□ 0.55
CASP4P49662 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.47■□□□□ 0.55
CASP4P49662 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CASP4P49662 AC124067.4-201ENST00000519691 2379 ntBASIC18.47■□□□□ 0.55
CASP4P49662 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.47■□□□□ 0.55
CASP4P49662 TOP3BP1-201ENST00000420768 1380 ntBASIC18.47■□□□□ 0.55
CASP4P49662 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.47■□□□□ 0.55
CASP4P49662 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CASP4P49662 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.47■□□□□ 0.55
CASP4P49662 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 AC108073.2-201ENST00000464002 357 ntBASIC18.47■□□□□ 0.55
CASP4P49662 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.47■□□□□ 0.55
CASP4P49662 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.47■□□□□ 0.55
CASP4P49662 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.47■□□□□ 0.55
CASP4P49662 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.47■□□□□ 0.55
CASP4P49662 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CASP4P49662 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.47■□□□□ 0.55
CASP4P49662 AC005593.1-201ENST00000624894 515 ntBASIC18.47■□□□□ 0.55
CASP4P49662 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms