Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CX3CR1P49238 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.96□□□□□ -0.01
CX3CR1P49238 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.96□□□□□ -0.01
CX3CR1P49238 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.96□□□□□ -0.01
CX3CR1P49238 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.96□□□□□ -0.01
CX3CR1P49238 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 SIGLEC16-201ENST00000599858 1437 ntBASIC14.96□□□□□ -0.01
CX3CR1P49238 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.96□□□□□ -0.01
CX3CR1P49238 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.96□□□□□ -0.01
CX3CR1P49238 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.96□□□□□ -0.01
CX3CR1P49238 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.96□□□□□ -0.02
CX3CR1P49238 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CX3CR1P49238 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CX3CR1P49238 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CX3CR1P49238 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
CX3CR1P49238 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CX3CR1P49238 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CX3CR1P49238 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 AC079776.2-201ENST00000641154 1609 ntBASIC14.95□□□□□ -0.02
CX3CR1P49238 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
CX3CR1P49238 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 AC011270.2-201ENST00000624293 2550 ntBASIC14.95□□□□□ -0.02
CX3CR1P49238 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.95□□□□□ -0.02
CX3CR1P49238 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 MIR1224-201ENST00000408193 85 ntBASIC14.95□□□□□ -0.02
CX3CR1P49238 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 KRT16P4-201ENST00000453883 522 ntBASIC14.95□□□□□ -0.02
CX3CR1P49238 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.95□□□□□ -0.02
CX3CR1P49238 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.95□□□□□ -0.02
CX3CR1P49238 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.95□□□□□ -0.02
CX3CR1P49238 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CX3CR1P49238 AC004817.3-201ENST00000602957 2129 ntBASIC14.95□□□□□ -0.02
CX3CR1P49238 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.95□□□□□ -0.02
CX3CR1P49238 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CX3CR1P49238 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CX3CR1P49238 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.94□□□□□ -0.02
CX3CR1P49238 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CX3CR1P49238 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CX3CR1P49238 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 LINC00982-205ENST00000420957 435 ntBASIC14.94□□□□□ -0.02
CX3CR1P49238 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.94□□□□□ -0.02
CX3CR1P49238 AC073592.4-201ENST00000623827 446 ntBASIC14.94□□□□□ -0.02
CX3CR1P49238 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CX3CR1P49238 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CX3CR1P49238 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms