Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC1A1P43005 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC1A1P43005 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A1P43005 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A1P43005 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A1P43005 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A1P43005 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC1A1P43005 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A1P43005 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A1P43005 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
SLC1A1P43005 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A1P43005 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC1A1P43005 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC1A1P43005 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC1A1P43005 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC1A1P43005 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC1A1P43005 AL121772.3-201ENST00000610840 674 ntBASIC17.75■□□□□ 0.43
SLC1A1P43005 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A1P43005 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 TOP3BP1-201ENST00000420768 1380 ntBASIC17.75■□□□□ 0.43
SLC1A1P43005 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC1A1P43005 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A1P43005 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A1P43005 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC1A1P43005 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SLC1A1P43005 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC1A1P43005 MTDHP3-201ENST00000594186 672 ntBASIC17.74■□□□□ 0.43
SLC1A1P43005 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 AL355877.3-201ENST00000622820 899 ntBASIC17.74■□□□□ 0.43
SLC1A1P43005 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A1P43005 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms