Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC29.42■■■□□ 2.3
NCAPD3P42695 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC29.42■■■□□ 2.3
NCAPD3P42695 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NCAPD3P42695 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC29.42■■■□□ 2.3
NCAPD3P42695 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC29.42■■■□□ 2.3
NCAPD3P42695 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NCAPD3P42695 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC29.42■■■□□ 2.3
NCAPD3P42695 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
NCAPD3P42695 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC29.42■■■□□ 2.3
NCAPD3P42695 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC29.42■■■□□ 2.3
NCAPD3P42695 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NCAPD3P42695 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC29.42■■■□□ 2.3
NCAPD3P42695 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
NCAPD3P42695 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC29.41■■■□□ 2.3
NCAPD3P42695 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
NCAPD3P42695 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
NCAPD3P42695 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC29.41■■■□□ 2.3
NCAPD3P42695 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 WDR53-204ENST00000433160 887 ntTSL 5 BASIC29.41■■■□□ 2.3
NCAPD3P42695 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC29.41■■■□□ 2.3
NCAPD3P42695 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
NCAPD3P42695 MIR5189-201ENST00000577370 114 ntBASIC29.41■■■□□ 2.3
NCAPD3P42695 RETN-203ENST00000629642 400 ntTSL 5 BASIC29.41■■■□□ 2.3
NCAPD3P42695 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NCAPD3P42695 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC29.41■■■□□ 2.3
NCAPD3P42695 AC108860.2-201ENST00000562760 2183 ntBASIC29.41■■■□□ 2.3
NCAPD3P42695 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NCAPD3P42695 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NCAPD3P42695 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NCAPD3P42695 APOC3-202ENST00000375345 604 ntTSL 5 BASIC29.4■■■□□ 2.3
NCAPD3P42695 AC092506.1-202ENST00000401022 528 ntBASIC29.4■■■□□ 2.3
NCAPD3P42695 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC29.4■■■□□ 2.3
NCAPD3P42695 GOLGA2P4-201ENST00000441462 777 ntBASIC29.4■■■□□ 2.3
NCAPD3P42695 FO681548.1-201ENST00000455617 1132 ntBASIC29.4■■■□□ 2.3
NCAPD3P42695 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC29.4■■■□□ 2.3
NCAPD3P42695 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC29.4■■■□□ 2.3
NCAPD3P42695 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
NCAPD3P42695 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC29.4■■■□□ 2.3
NCAPD3P42695 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
NCAPD3P42695 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NCAPD3P42695 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NCAPD3P42695 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC29.4■■■□□ 2.3
NCAPD3P42695 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC29.4■■■□□ 2.3
NCAPD3P42695 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC29.39■■■□□ 2.3
NCAPD3P42695 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC29.39■■■□□ 2.3
NCAPD3P42695 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC29.39■■■□□ 2.3
NCAPD3P42695 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC29.39■■■□□ 2.3
NCAPD3P42695 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC29.39■■■□□ 2.3
NCAPD3P42695 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NCAPD3P42695 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
NCAPD3P42695 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
NCAPD3P42695 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
NCAPD3P42695 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC29.39■■■□□ 2.29
NCAPD3P42695 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC29.38■■■□□ 2.29
NCAPD3P42695 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC29.38■■■□□ 2.29
NCAPD3P42695 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC29.38■■■□□ 2.29
NCAPD3P42695 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
NCAPD3P42695 RARRES2P5-201ENST00000564013 466 ntBASIC29.38■■■□□ 2.29
NCAPD3P42695 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
NCAPD3P42695 AC074044.1-201ENST00000609673 707 ntBASIC29.38■■■□□ 2.29
NCAPD3P42695 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC29.38■■■□□ 2.29
NCAPD3P42695 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
NCAPD3P42695 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCAPD3P42695 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCAPD3P42695 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCAPD3P42695 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC29.37■■■□□ 2.29
NCAPD3P42695 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NCAPD3P42695 MIR1247-201ENST00000408206 136 ntBASIC29.37■■■□□ 2.29
NCAPD3P42695 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC29.37■■■□□ 2.29
NCAPD3P42695 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC29.37■■■□□ 2.29
NCAPD3P42695 RNA5SP423-201ENST00000517127 109 ntBASIC29.37■■■□□ 2.29
NCAPD3P42695 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC29.37■■■□□ 2.29
NCAPD3P42695 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NCAPD3P42695 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
NCAPD3P42695 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
NCAPD3P42695 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.37■■■□□ 2.29
NCAPD3P42695 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCAPD3P42695 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC29.37■■■□□ 2.29
NCAPD3P42695 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms