Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT20P35900 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT20P35900 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.2■□□□□ 0.18
KRT20P35900 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT20P35900 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KRT20P35900 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT20P35900 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT20P35900 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KRT20P35900 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT20P35900 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT20P35900 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
KRT20P35900 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 TSPY19P-201ENST00000418461 509 ntBASIC16.19■□□□□ 0.18
KRT20P35900 TSPY18P-201ENST00000441642 509 ntBASIC16.19■□□□□ 0.18
KRT20P35900 STK19B-204ENST00000512515 211 ntBASIC16.19■□□□□ 0.18
KRT20P35900 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT20P35900 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT20P35900 AC019129.2-201ENST00000609837 1235 ntBASIC16.19■□□□□ 0.18
KRT20P35900 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.19■□□□□ 0.18
KRT20P35900 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT20P35900 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT20P35900 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT20P35900 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT20P35900 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 AC008741.2-201ENST00000612792 3115 ntBASIC16.18■□□□□ 0.18
KRT20P35900 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 AC003669.1-201ENST00000334569 611 ntBASIC16.18■□□□□ 0.18
KRT20P35900 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT20P35900 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 KLF4P1-201ENST00000412782 1185 ntBASIC16.18■□□□□ 0.18
KRT20P35900 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT20P35900 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT20P35900 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT20P35900 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 AL139327.4-201ENST00000612362 153 ntBASIC16.18■□□□□ 0.18
KRT20P35900 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT20P35900 AC012313.10-201ENST00000623509 926 ntBASIC16.18■□□□□ 0.18
KRT20P35900 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT20P35900 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms