Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPB2P35606 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
COPB2P35606 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPB2P35606 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPB2P35606 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COPB2P35606 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COPB2P35606 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPB2P35606 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPB2P35606 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
COPB2P35606 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.33■□□□□ 0.68
COPB2P35606 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 RBPMS2P1-201ENST00000437762 623 ntBASIC19.33■□□□□ 0.68
COPB2P35606 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.33■□□□□ 0.68
COPB2P35606 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COPB2P35606 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.33■□□□□ 0.68
COPB2P35606 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.33■□□□□ 0.68
COPB2P35606 AJ011932.1-201ENST00000621707 465 ntBASIC19.33■□□□□ 0.68
COPB2P35606 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.33■□□□□ 0.68
COPB2P35606 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.33■□□□□ 0.68
COPB2P35606 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.33■□□□□ 0.68
COPB2P35606 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPB2P35606 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COPB2P35606 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.33■□□□□ 0.68
COPB2P35606 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 TUBB3P1-201ENST00000405796 1332 ntBASIC19.32■□□□□ 0.68
COPB2P35606 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.32■□□□□ 0.68
COPB2P35606 KLF2P3-201ENST00000451977 1087 ntBASIC19.32■□□□□ 0.68
COPB2P35606 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 AC008267.7-201ENST00000624570 1194 ntBASIC19.32■□□□□ 0.68
COPB2P35606 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COPB2P35606 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COPB2P35606 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPB2P35606 AL021920.2-201ENST00000624828 1351 ntBASIC19.32■□□□□ 0.68
COPB2P35606 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 UXT-AS1-201ENST00000590504 1525 ntBASIC19.31■□□□□ 0.68
COPB2P35606 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COPB2P35606 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COPB2P35606 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.31■□□□□ 0.68
COPB2P35606 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
COPB2P35606 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.31■□□□□ 0.68
COPB2P35606 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPB2P35606 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
COPB2P35606 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms