Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 AP002383.4-201ENST00000442518 975 ntBASIC17.97■□□□□ 0.47
CTNNA1P35221 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.97■□□□□ 0.47
CTNNA1P35221 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.97■□□□□ 0.47
CTNNA1P35221 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTNNA1P35221 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTNNA1P35221 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 AC148477.5-201ENST00000625164 1645 ntBASIC17.97■□□□□ 0.47
CTNNA1P35221 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTNNA1P35221 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.97■□□□□ 0.47
CTNNA1P35221 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.97■□□□□ 0.47
CTNNA1P35221 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.97■□□□□ 0.47
CTNNA1P35221 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTNNA1P35221 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTNNA1P35221 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNNA1P35221 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNNA1P35221 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.96■□□□□ 0.47
CTNNA1P35221 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNNA1P35221 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.96■□□□□ 0.47
CTNNA1P35221 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 NUS1P1-201ENST00000446295 882 ntBASIC17.96■□□□□ 0.47
CTNNA1P35221 KRT17P6-201ENST00000453795 1220 ntBASIC17.96■□□□□ 0.47
CTNNA1P35221 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.96■□□□□ 0.47
CTNNA1P35221 AC096582.2-201ENST00000510860 516 ntBASIC17.96■□□□□ 0.47
CTNNA1P35221 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.96■□□□□ 0.47
CTNNA1P35221 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.96■□□□□ 0.47
CTNNA1P35221 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.96■□□□□ 0.47
CTNNA1P35221 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CTNNA1P35221 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.96■□□□□ 0.47
CTNNA1P35221 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTNNA1P35221 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTNNA1P35221 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTNNA1P35221 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.46
CTNNA1P35221 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.96■□□□□ 0.46
CTNNA1P35221 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTNNA1P35221 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNNA1P35221 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 NSUN5P1-202ENST00000421140 1535 ntBASIC17.95■□□□□ 0.46
CTNNA1P35221 NSUN5P2-203ENST00000457352 1529 ntBASIC17.95■□□□□ 0.46
CTNNA1P35221 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 ACTG1P4-201ENST00000425123 1122 ntBASIC17.95■□□□□ 0.46
CTNNA1P35221 MINOS1P3-201ENST00000457048 203 ntBASIC17.95■□□□□ 0.46
CTNNA1P35221 TOB2P1-201ENST00000469761 992 ntBASIC17.95■□□□□ 0.46
CTNNA1P35221 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms