Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 AC004870.1-201ENST00000315132 882 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 KRT18P67-201ENST00000432816 1264 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN3P26045 RPS15P9-201ENST00000494093 319 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN3P26045 KRT126P-201ENST00000549467 1181 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN3P26045 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN3P26045 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN3P26045 AC008735.5-201ENST00000623544 497 ntBASIC17.31■□□□□ 0.36
PTPN3P26045 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PTPN3P26045 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN3P26045 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN3P26045 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN3P26045 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN3P26045 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
PTPN3P26045 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN3P26045 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN3P26045 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN3P26045 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN3P26045 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 LINC00895-201ENST00000629028 1637 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN3P26045 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 AF186996.4-201ENST00000467186 377 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN3P26045 AC136632.2-201ENST00000512891 861 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 AC012640.2-201ENST00000561606 901 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN3P26045 AC104692.2-201ENST00000603054 253 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 AC124067.4-201ENST00000519691 2379 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN3P26045 AL118508.1-201ENST00000613502 2345 ntBASIC17.3■□□□□ 0.36
PTPN3P26045 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN3P26045 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTPN3P26045 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PTPN3P26045 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPN3P26045 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN3P26045 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
PTPN3P26045 SLC25A6P2-201ENST00000497974 877 ntBASIC17.29■□□□□ 0.36
PTPN3P26045 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPN3P26045 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.29■□□□□ 0.36
PTPN3P26045 REXO1L3P-201ENST00000622202 1288 ntBASIC17.29■□□□□ 0.36
PTPN3P26045 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN3P26045 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN3P26045 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN3P26045 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN3P26045 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN3P26045 TOP3BP1-201ENST00000420768 1380 ntBASIC17.28■□□□□ 0.36
PTPN3P26045 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms