Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.12■□□□□ 0.33
XPAP23025 AC096734.2-201ENST00000562054 433 ntBASIC17.12■□□□□ 0.33
XPAP23025 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 AC010507.1-201ENST00000633895 436 ntBASIC17.12■□□□□ 0.33
XPAP23025 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 BCAR1-209ENST00000546196 1340 ntBASIC17.12■□□□□ 0.33
XPAP23025 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
XPAP23025 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.12■□□□□ 0.33
XPAP23025 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 AC002310.6-201ENST00000624451 1377 ntBASIC17.12■□□□□ 0.33
XPAP23025 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XPAP23025 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
XPAP23025 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
XPAP23025 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
XPAP23025 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.11■□□□□ 0.33
XPAP23025 DNAJB3-201ENST00000446806 729 ntBASIC17.11■□□□□ 0.33
XPAP23025 AL513480.1-201ENST00000451731 511 ntBASIC17.11■□□□□ 0.33
XPAP23025 SLC25A6P2-201ENST00000497974 877 ntBASIC17.11■□□□□ 0.33
XPAP23025 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 OR7E47P-204ENST00000575924 449 ntBASIC17.11■□□□□ 0.33
XPAP23025 MIR3687-2-201ENST00000577708 61 ntBASIC17.11■□□□□ 0.33
XPAP23025 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 AC023141.13-201ENST00000604991 943 ntBASIC17.11■□□□□ 0.33
XPAP23025 MIR3687-1-201ENST00000614492 61 ntBASIC17.11■□□□□ 0.33
XPAP23025 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
XPAP23025 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.11■□□□□ 0.33
XPAP23025 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XPAP23025 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 IGLL3P-201ENST00000412472 434 ntBASIC17.1■□□□□ 0.33
XPAP23025 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 AC004877.2-201ENST00000623941 599 ntBASIC17.1■□□□□ 0.33
XPAP23025 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
XPAP23025 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.1■□□□□ 0.33
XPAP23025 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XPAP23025 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms