Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.59□□□□□ -0.07
CCL1P22362 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.59□□□□□ -0.07
CCL1P22362 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.59□□□□□ -0.07
CCL1P22362 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 MIR4492-201ENST00000581627 80 ntBASIC14.59□□□□□ -0.07
CCL1P22362 MTDHP3-201ENST00000594186 672 ntBASIC14.59□□□□□ -0.07
CCL1P22362 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 AC004706.3-202ENST00000621574 984 ntBASIC14.59□□□□□ -0.07
CCL1P22362 REXO1L3P-201ENST00000622202 1288 ntBASIC14.59□□□□□ -0.07
CCL1P22362 AC093458.2-201ENST00000623150 629 ntBASIC14.59□□□□□ -0.07
CCL1P22362 AF228730.7-201ENST00000641842 219 ntBASIC14.59□□□□□ -0.07
CCL1P22362 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCL1P22362 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCL1P22362 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.59□□□□□ -0.07
CCL1P22362 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCL1P22362 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CCL1P22362 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.58□□□□□ -0.07
CCL1P22362 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.58□□□□□ -0.07
CCL1P22362 GGT3P-204ENST00000453783 1664 ntBASIC14.58□□□□□ -0.07
CCL1P22362 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL1P22362 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCL1P22362 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCL1P22362 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CCL1P22362 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 FGFR3P6-201ENST00000457012 610 ntBASIC14.58□□□□□ -0.08
CCL1P22362 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.58□□□□□ -0.08
CCL1P22362 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.58□□□□□ -0.08
CCL1P22362 MPDU1-223ENST00000582151 728 ntBASIC14.58□□□□□ -0.08
CCL1P22362 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCL1P22362 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL1P22362 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.58□□□□□ -0.08
CCL1P22362 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL1P22362 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms