Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.13■□□□□ 0.33
VCLP18206 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.13■□□□□ 0.33
VCLP18206 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 AC008741.2-201ENST00000612792 3115 ntBASIC17.13■□□□□ 0.33
VCLP18206 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.13■□□□□ 0.33
VCLP18206 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VCLP18206 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VCLP18206 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.13■□□□□ 0.33
VCLP18206 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VCLP18206 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VCLP18206 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.13■□□□□ 0.33
VCLP18206 AL031284.1-201ENST00000419297 478 ntBASIC17.13■□□□□ 0.33
VCLP18206 LAGE3P1-201ENST00000425356 484 ntBASIC17.13■□□□□ 0.33
VCLP18206 AC018712.1-201ENST00000455767 687 ntBASIC17.13■□□□□ 0.33
VCLP18206 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.13■□□□□ 0.33
VCLP18206 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VCLP18206 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.13■□□□□ 0.33
VCLP18206 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.13■□□□□ 0.33
VCLP18206 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.13■□□□□ 0.33
VCLP18206 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.13■□□□□ 0.33
VCLP18206 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.13■□□□□ 0.33
VCLP18206 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
VCLP18206 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCLP18206 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 MRPL3P1-201ENST00000400109 1033 ntBASIC17.12■□□□□ 0.33
VCLP18206 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 AC139887.3-201ENST00000568585 713 ntBASIC17.12■□□□□ 0.33
VCLP18206 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.12■□□□□ 0.33
VCLP18206 AL589182.2-201ENST00000619332 1049 ntBASIC17.12■□□□□ 0.33
VCLP18206 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.12■□□□□ 0.33
VCLP18206 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.12■□□□□ 0.33
VCLP18206 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCLP18206 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCLP18206 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.11■□□□□ 0.33
VCLP18206 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.11■□□□□ 0.33
VCLP18206 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
VCLP18206 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCLP18206 AC079776.4-201ENST00000511039 504 ntBASIC17.11■□□□□ 0.33
VCLP18206 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.11■□□□□ 0.33
VCLP18206 AC006557.2-201ENST00000592985 1240 ntBASIC17.11■□□□□ 0.33
VCLP18206 AC025062.2-201ENST00000605477 670 ntBASIC17.11■□□□□ 0.33
VCLP18206 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.11■□□□□ 0.33
VCLP18206 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.11■□□□□ 0.33
VCLP18206 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.11■□□□□ 0.33
VCLP18206 AC046185.3-201ENST00000623228 1824 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms