Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRKCAP17252 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRKCAP17252 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.8■□□□□ 0.12
PRKCAP17252 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRKCAP17252 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRKCAP17252 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRKCAP17252 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.8■□□□□ 0.12
PRKCAP17252 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRKCAP17252 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.79■□□□□ 0.12
PRKCAP17252 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.79■□□□□ 0.12
PRKCAP17252 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.79■□□□□ 0.12
PRKCAP17252 AP001094.4-201ENST00000579008 2176 ntBASIC15.79■□□□□ 0.12
PRKCAP17252 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PRKCAP17252 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PRKCAP17252 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PRKCAP17252 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 SAPCD2P3-201ENST00000455031 850 ntBASIC15.79■□□□□ 0.12
PRKCAP17252 SIGLEC30P-201ENST00000455569 941 ntBASIC15.79■□□□□ 0.12
PRKCAP17252 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.79■□□□□ 0.12
PRKCAP17252 MTDHP3-201ENST00000594186 672 ntBASIC15.79■□□□□ 0.12
PRKCAP17252 AL355877.3-201ENST00000622820 899 ntBASIC15.79■□□□□ 0.12
PRKCAP17252 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PRKCAP17252 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.79■□□□□ 0.12
PRKCAP17252 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.79■□□□□ 0.12
PRKCAP17252 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRKCAP17252 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRKCAP17252 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PRKCAP17252 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 TCAF2P1-201ENST00000291129 2421 ntBASIC15.78■□□□□ 0.12
PRKCAP17252 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PRKCAP17252 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PRKCAP17252 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.78■□□□□ 0.12
PRKCAP17252 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 AC008608.2-201ENST00000606089 416 ntBASIC15.78■□□□□ 0.12
PRKCAP17252 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 AL121761.2-201ENST00000598007 1648 ntBASIC15.78■□□□□ 0.12
PRKCAP17252 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.78■□□□□ 0.12
PRKCAP17252 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.78■□□□□ 0.12
PRKCAP17252 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRKCAP17252 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms