Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1DP16402 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1DP16402 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HIST1H1DP16402 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1DP16402 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1DP16402 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HIST1H1DP16402 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1DP16402 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HIST1H1DP16402 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 AL645929.1-201ENST00000420084 975 ntBASIC14.43□□□□□ -0.1
HIST1H1DP16402 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 AC009533.2-201ENST00000543664 586 ntBASIC14.43□□□□□ -0.1
HIST1H1DP16402 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 AC090616.6-201ENST00000582640 721 ntBASIC14.43□□□□□ -0.1
HIST1H1DP16402 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.43□□□□□ -0.1
HIST1H1DP16402 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 ME2P1-201ENST00000426028 1970 ntBASIC14.43□□□□□ -0.1
HIST1H1DP16402 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 AC132872.4-202ENST00000622924 2756 ntBASIC14.43□□□□□ -0.1
HIST1H1DP16402 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1DP16402 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HIST1H1DP16402 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 LINC00895-201ENST00000629028 1637 ntBASIC14.42□□□□□ -0.1
HIST1H1DP16402 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 DUX4L17-201ENST00000557360 1267 ntBASIC14.42□□□□□ -0.1
HIST1H1DP16402 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 IGHV3-41-201ENST00000613121 348 ntBASIC14.42□□□□□ -0.1
HIST1H1DP16402 AC083849.1-201ENST00000615227 514 ntBASIC14.42□□□□□ -0.1
HIST1H1DP16402 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 AD001527.2-201ENST00000622994 785 ntBASIC14.42□□□□□ -0.1
HIST1H1DP16402 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 AC073592.5-201ENST00000624854 528 ntBASIC14.42□□□□□ -0.1
HIST1H1DP16402 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1DP16402 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1DP16402 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms