Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA4P13612 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA4P13612 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.63■□□□□ 0.57
ITGA4P13612 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ITGA4P13612 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.63■□□□□ 0.57
ITGA4P13612 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.63■□□□□ 0.57
ITGA4P13612 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.63■□□□□ 0.57
ITGA4P13612 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 AC025580.3-201ENST00000617932 1424 ntBASIC18.63■□□□□ 0.57
ITGA4P13612 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ITGA4P13612 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ITGA4P13612 HTR5BP-201ENST00000430851 1154 ntBASIC18.62■□□□□ 0.57
ITGA4P13612 AL078644.1-201ENST00000609881 752 ntBASIC18.62■□□□□ 0.57
ITGA4P13612 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.62■□□□□ 0.57
ITGA4P13612 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.62■□□□□ 0.57
ITGA4P13612 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 AL121761.2-201ENST00000598007 1648 ntBASIC18.62■□□□□ 0.57
ITGA4P13612 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ITGA4P13612 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITGA4P13612 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
ITGA4P13612 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ITGA4P13612 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ITGA4P13612 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ITGA4P13612 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ITGA4P13612 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA4P13612 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.61■□□□□ 0.57
ITGA4P13612 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.61■□□□□ 0.57
ITGA4P13612 AC087163.2-201ENST00000457299 853 ntBASIC18.61■□□□□ 0.57
ITGA4P13612 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
ITGA4P13612 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.61■□□□□ 0.57
ITGA4P13612 MIR4469-201ENST00000583919 79 ntBASIC18.61■□□□□ 0.57
ITGA4P13612 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA4P13612 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA4P13612 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.61■□□□□ 0.57
ITGA4P13612 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ITGA4P13612 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA4P13612 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA4P13612 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ITGA4P13612 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ITGA4P13612 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
ITGA4P13612 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
ITGA4P13612 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.6■□□□□ 0.57
ITGA4P13612 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA4P13612 MKNK2P1-201ENST00000437526 628 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 FAM185BP-201ENST00000443595 716 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 DNAJB3-202ENST00000449667 1266 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 AC074386.1-202ENST00000463561 864 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 SLC25A6P2-201ENST00000497974 877 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 YBX1P5-201ENST00000509441 847 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA4P13612 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA4P13612 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ITGA4P13612 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA4P13612 UBALD1-205ENST00000590891 2641 ntBASIC18.6■□□□□ 0.57
ITGA4P13612 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms