Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC190387.1-201ENST00000551683 408 ntBASIC19.04■□□□□ 0.64
COL11A1P12107 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
COL11A1P12107 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL11A1P12107 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
COL11A1P12107 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL11A1P12107 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.03■□□□□ 0.64
COL11A1P12107 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL11A1P12107 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.03■□□□□ 0.64
COL11A1P12107 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL11A1P12107 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.03■□□□□ 0.64
COL11A1P12107 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.03■□□□□ 0.64
COL11A1P12107 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
COL11A1P12107 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
COL11A1P12107 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 AC018529.1-201ENST00000613063 361 ntBASIC19.03■□□□□ 0.64
COL11A1P12107 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL11A1P12107 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
COL11A1P12107 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COL11A1P12107 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.02■□□□□ 0.64
COL11A1P12107 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.02■□□□□ 0.64
COL11A1P12107 AC005225.4-201ENST00000557330 545 ntBASIC19.02■□□□□ 0.64
COL11A1P12107 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.02■□□□□ 0.64
COL11A1P12107 MPDU1-223ENST00000582151 728 ntBASIC19.02■□□□□ 0.64
COL11A1P12107 AL844908.2-201ENST00000609461 460 ntBASIC19.02■□□□□ 0.64
COL11A1P12107 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
COL11A1P12107 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
COL11A1P12107 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.02■□□□□ 0.64
COL11A1P12107 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL11A1P12107 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COL11A1P12107 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.02■□□□□ 0.64
COL11A1P12107 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.02■□□□□ 0.64
COL11A1P12107 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
COL11A1P12107 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.02■□□□□ 0.64
COL11A1P12107 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
COL11A1P12107 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.02■□□□□ 0.63
COL11A1P12107 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.02■□□□□ 0.63
COL11A1P12107 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 MTND6P24-201ENST00000440466 518 ntBASIC19.02■□□□□ 0.63
COL11A1P12107 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.02■□□□□ 0.63
COL11A1P12107 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 SPDYE22P-201ENST00000582158 798 ntBASIC19.02■□□□□ 0.63
COL11A1P12107 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.02■□□□□ 0.63
COL11A1P12107 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.02■□□□□ 0.63
COL11A1P12107 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
COL11A1P12107 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.02■□□□□ 0.63
COL11A1P12107 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL11A1P12107 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
COL11A1P12107 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COL11A1P12107 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COL11A1P12107 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL11A1P12107 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL11A1P12107 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.01■□□□□ 0.63
COL11A1P12107 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.01■□□□□ 0.63
COL11A1P12107 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.01■□□□□ 0.63
COL11A1P12107 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
COL11A1P12107 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.01■□□□□ 0.63
COL11A1P12107 AL133215.2-201ENST00000609242 977 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms