Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC027307.2-201ENST00000591252 911 ntBASIC17.15■□□□□ 0.34
CHRNB1P11230 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHRNB1P11230 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CHRNB1P11230 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHRNB1P11230 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRNB1P11230 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB1P11230 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB1P11230 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRNB1P11230 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNB1P11230 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB1P11230 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNB1P11230 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB1P11230 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHRNB1P11230 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNB1P11230 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB1P11230 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB1P11230 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHRNB1P11230 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
CHRNB1P11230 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 LYSMD4-203ENST00000378904 2122 ntBASIC17.14■□□□□ 0.33
CHRNB1P11230 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CHRNB1P11230 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CHRNB1P11230 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHRNB1P11230 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB1P11230 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB1P11230 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB1P11230 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB1P11230 AC004890.2-204ENST00000481968 304 ntBASIC17.14■□□□□ 0.33
CHRNB1P11230 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.14■□□□□ 0.33
CHRNB1P11230 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB1P11230 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB1P11230 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHRNB1P11230 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHRNB1P11230 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHRNB1P11230 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CHRNB1P11230 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB1P11230 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 AC124067.4-201ENST00000519691 2379 ntBASIC17.14■□□□□ 0.33
CHRNB1P11230 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB1P11230 AL391005.1-201ENST00000623953 2435 ntBASIC17.13■□□□□ 0.33
CHRNB1P11230 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNB1P11230 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.13■□□□□ 0.33
CHRNB1P11230 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CHRNB1P11230 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CHRNB1P11230 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 HCG4-201ENST00000418983 998 ntBASIC17.13■□□□□ 0.33
CHRNB1P11230 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 AC241585.1-201ENST00000433527 519 ntBASIC17.13■□□□□ 0.33
CHRNB1P11230 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.13■□□□□ 0.33
CHRNB1P11230 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 MIR4453-201ENST00000584019 89 ntBASIC17.13■□□□□ 0.33
CHRNB1P11230 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHRNB1P11230 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHRNB1P11230 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNB1P11230 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB1P11230 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNB1P11230 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHRNB1P11230 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 RNU1-129P-201ENST00000384064 167 ntBASIC17.12■□□□□ 0.33
CHRNB1P11230 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CHRNB1P11230 MRPS18AP1-201ENST00000414458 589 ntBASIC17.12■□□□□ 0.33
CHRNB1P11230 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNB1P11230 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHRNB1P11230 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.12■□□□□ 0.33
CHRNB1P11230 SERBP1P5-201ENST00000510079 1181 ntBASIC17.12■□□□□ 0.33
CHRNB1P11230 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB1P11230 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNB1P11230 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.12■□□□□ 0.33
CHRNB1P11230 U1.21-201ENST00000580816 167 ntBASIC17.12■□□□□ 0.33
CHRNB1P11230 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms