Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
UBCP0CG48 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.95□□□□□ -0.02
UBCP0CG48 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.95□□□□□ -0.02
UBCP0CG48 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.95□□□□□ -0.02
UBCP0CG48 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.95□□□□□ -0.02
UBCP0CG48 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.95□□□□□ -0.02
UBCP0CG48 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.95□□□□□ -0.02
UBCP0CG48 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.95□□□□□ -0.02
UBCP0CG48 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.95□□□□□ -0.02
UBCP0CG48 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.95□□□□□ -0.02
UBCP0CG48 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.94□□□□□ -0.02
UBCP0CG48 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.94□□□□□ -0.02
UBCP0CG48 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.94□□□□□ -0.02
UBCP0CG48 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.94□□□□□ -0.02
UBCP0CG48 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.94□□□□□ -0.02
UBCP0CG48 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.94□□□□□ -0.02
UBCP0CG48 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.94□□□□□ -0.02
UBCP0CG48 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
UBCP0CG48 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.94□□□□□ -0.02
UBCP0CG48 NTF6B-201ENST00000591913 560 ntBASIC14.94□□□□□ -0.02
UBCP0CG48 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
UBCP0CG48 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBCP0CG48 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UBCP0CG48 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
UBCP0CG48 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
UBCP0CG48 LINC02199-201ENST00000506655 2702 ntBASIC14.94□□□□□ -0.02
UBCP0CG48 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UBCP0CG48 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
UBCP0CG48 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
UBCP0CG48 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
UBCP0CG48 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.93□□□□□ -0.02
UBCP0CG48 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.93□□□□□ -0.02
UBCP0CG48 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 RN7SL850P-201ENST00000579959 291 ntBASIC14.93□□□□□ -0.02
UBCP0CG48 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 Z69720.1-201ENST00000601483 472 ntBASIC14.93□□□□□ -0.02
UBCP0CG48 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.93□□□□□ -0.02
UBCP0CG48 AL121956.5-201ENST00000625261 221 ntBASIC14.93□□□□□ -0.02
UBCP0CG48 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
UBCP0CG48 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
UBCP0CG48 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms