Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 MIR3180-1-201ENST00000580374 94 ntBASIC18.41■□□□□ 0.54
CCDC172P0C7W6 MIR3180-3-201ENST00000584616 94 ntBASIC18.41■□□□□ 0.54
CCDC172P0C7W6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC172P0C7W6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 ATP5G2P1-201ENST00000433580 426 ntBASIC18.4■□□□□ 0.54
CCDC172P0C7W6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 MIR5100-201ENST00000579544 119 ntBASIC18.4■□□□□ 0.54
CCDC172P0C7W6 AC099336.1-202ENST00000602961 463 ntBASIC18.4■□□□□ 0.54
CCDC172P0C7W6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC172P0C7W6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC172P0C7W6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC172P0C7W6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC172P0C7W6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CCDC172P0C7W6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 NPAP1P7-201ENST00000613027 823 ntBASIC18.39■□□□□ 0.53
CCDC172P0C7W6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms