Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC005915.1-201ENST00000624912 2018 ntBASIC18.99■□□□□ 0.63
CYP3A4P08684 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CYP3A4P08684 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CYP3A4P08684 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CYP3A4P08684 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CYP3A4P08684 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CYP3A4P08684 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.99■□□□□ 0.63
CYP3A4P08684 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CYP3A4P08684 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CYP3A4P08684 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.98■□□□□ 0.63
CYP3A4P08684 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 AC004967.1-201ENST00000453589 447 ntBASIC18.98■□□□□ 0.63
CYP3A4P08684 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CYP3A4P08684 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CYP3A4P08684 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 AL671710.1-201ENST00000610245 2349 ntBASIC18.98■□□□□ 0.63
CYP3A4P08684 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CYP3A4P08684 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.98■□□□□ 0.63
CYP3A4P08684 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CYP3A4P08684 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.98■□□□□ 0.63
CYP3A4P08684 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CYP3A4P08684 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 AL355306.1-201ENST00000415580 579 ntBASIC18.97■□□□□ 0.63
CYP3A4P08684 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.97■□□□□ 0.63
CYP3A4P08684 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.97■□□□□ 0.63
CYP3A4P08684 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.97■□□□□ 0.63
CYP3A4P08684 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.97■□□□□ 0.63
CYP3A4P08684 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 AC021097.1-201ENST00000607902 574 ntBASIC18.97■□□□□ 0.63
CYP3A4P08684 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.97■□□□□ 0.63
CYP3A4P08684 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.97■□□□□ 0.63
CYP3A4P08684 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.97■□□□□ 0.63
CYP3A4P08684 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CYP3A4P08684 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.97■□□□□ 0.63
CYP3A4P08684 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CYP3A4P08684 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CYP3A4P08684 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.96■□□□□ 0.63
CYP3A4P08684 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.96■□□□□ 0.63
CYP3A4P08684 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.96■□□□□ 0.63
CYP3A4P08684 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CYP3A4P08684 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.96■□□□□ 0.63
CYP3A4P08684 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms