Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.64■□□□□ 0.09
THBS1P07996 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 AC013467.2-201ENST00000605472 835 ntBASIC15.64■□□□□ 0.09
THBS1P07996 REXO1L6P-202ENST00000619970 1078 ntBASIC15.64■□□□□ 0.09
THBS1P07996 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.64■□□□□ 0.09
THBS1P07996 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.64■□□□□ 0.09
THBS1P07996 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
THBS1P07996 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THBS1P07996 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
THBS1P07996 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.63■□□□□ 0.09
THBS1P07996 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.63■□□□□ 0.09
THBS1P07996 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
THBS1P07996 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.63■□□□□ 0.09
THBS1P07996 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.63■□□□□ 0.09
THBS1P07996 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.63■□□□□ 0.09
THBS1P07996 PAWRP1-201ENST00000451083 565 ntBASIC15.63■□□□□ 0.09
THBS1P07996 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 LINC01711-201ENST00000598340 967 ntBASIC15.63■□□□□ 0.09
THBS1P07996 MTDHP4-201ENST00000600287 670 ntBASIC15.63■□□□□ 0.09
THBS1P07996 AL031008.1-201ENST00000619963 541 ntBASIC15.63■□□□□ 0.09
THBS1P07996 AC004706.3-202ENST00000621574 984 ntBASIC15.63■□□□□ 0.09
THBS1P07996 AL139011.1-202ENST00000642063 584 ntBASIC15.63■□□□□ 0.09
THBS1P07996 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
THBS1P07996 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.63■□□□□ 0.09
THBS1P07996 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THBS1P07996 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.62■□□□□ 0.09
THBS1P07996 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.62■□□□□ 0.09
THBS1P07996 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
THBS1P07996 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
THBS1P07996 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.62■□□□□ 0.09
THBS1P07996 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 SART3-203ENST00000546611 1184 ntBASIC15.62■□□□□ 0.09
THBS1P07996 AL160237.2-201ENST00000556165 472 ntBASIC15.62■□□□□ 0.09
THBS1P07996 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.62■□□□□ 0.09
THBS1P07996 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.62■□□□□ 0.09
THBS1P07996 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.62■□□□□ 0.09
THBS1P07996 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.62■□□□□ 0.09
THBS1P07996 AF228730.7-201ENST00000641842 219 ntBASIC15.62■□□□□ 0.09
THBS1P07996 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
THBS1P07996 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
THBS1P07996 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THBS1P07996 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
THBS1P07996 TOP3BP1-201ENST00000420768 1380 ntBASIC15.62■□□□□ 0.09
THBS1P07996 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.62■□□□□ 0.09
THBS1P07996 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
THBS1P07996 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
THBS1P07996 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 PCDHB19P-201ENST00000570871 2371 ntBASIC15.61■□□□□ 0.09
THBS1P07996 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms