Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC01568-207ENST00000641790 1380 ntBASIC19.1■□□□□ 0.65
TPM3P06753 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 HLA-A-202ENST00000376806 1854 ntBASIC19.1■□□□□ 0.65
TPM3P06753 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TPM3P06753 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TPM3P06753 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.1■□□□□ 0.65
TPM3P06753 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.1■□□□□ 0.65
TPM3P06753 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.1■□□□□ 0.65
TPM3P06753 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TPM3P06753 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.1■□□□□ 0.65
TPM3P06753 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TPM3P06753 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.1■□□□□ 0.65
TPM3P06753 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TPM3P06753 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TPM3P06753 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TPM3P06753 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM3P06753 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM3P06753 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 AC126177.1-201ENST00000547829 2218 ntBASIC19.09■□□□□ 0.65
TPM3P06753 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TPM3P06753 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.09■□□□□ 0.65
TPM3P06753 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 GPR32P1-201ENST00000601788 811 ntBASIC19.09■□□□□ 0.65
TPM3P06753 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 AL023973.1-201ENST00000624619 620 ntBASIC19.09■□□□□ 0.65
TPM3P06753 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM3P06753 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM3P06753 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM3P06753 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.08■□□□□ 0.65
TPM3P06753 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM3P06753 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
TPM3P06753 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TPM3P06753 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM3P06753 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.08■□□□□ 0.65
TPM3P06753 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TPM3P06753 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM3P06753 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TPM3P06753 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TPM3P06753 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TPM3P06753 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.08■□□□□ 0.64
TPM3P06753 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TPM3P06753 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM3P06753 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM3P06753 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
TPM3P06753 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM3P06753 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TPM3P06753 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM3P06753 EGFEM1P-202ENST00000431685 1563 ntBASIC19.07■□□□□ 0.64
TPM3P06753 AC010460.3-201ENST00000511359 1579 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms