Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT6AP02538 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT6AP02538 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT6AP02538 AC010331.1-201ENST00000611423 582 ntBASIC16.5■□□□□ 0.23
KRT6AP02538 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT6AP02538 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT6AP02538 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT6AP02538 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
KRT6AP02538 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT6AP02538 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT6AP02538 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 LINC00982-205ENST00000420957 435 ntBASIC16.49■□□□□ 0.23
KRT6AP02538 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT6AP02538 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT6AP02538 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 AC138894.3-201ENST00000603787 634 ntBASIC16.49■□□□□ 0.23
KRT6AP02538 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 AC093458.2-201ENST00000623150 629 ntBASIC16.49■□□□□ 0.23
KRT6AP02538 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 AC004817.3-201ENST00000602957 2129 ntBASIC16.49■□□□□ 0.23
KRT6AP02538 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT6AP02538 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT6AP02538 AL596257.1-201ENST00000641463 2694 ntBASIC16.49■□□□□ 0.23
KRT6AP02538 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT6AP02538 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT6AP02538 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 AP005117.1-201ENST00000584346 1413 ntBASIC16.48■□□□□ 0.23
KRT6AP02538 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
KRT6AP02538 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 AL445228.2-201ENST00000605589 952 ntBASIC16.48■□□□□ 0.23
KRT6AP02538 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 AL021920.2-201ENST00000624828 1351 ntBASIC16.48■□□□□ 0.23
KRT6AP02538 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT6AP02538 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT6AP02538 PCDHB17P-201ENST00000539533 2393 ntBASIC16.48■□□□□ 0.23
KRT6AP02538 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT6AP02538 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6AP02538 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6AP02538 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6AP02538 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms