Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NKX2-2O95096 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX2-2O95096 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 MRPL20P1-201ENST00000400819 433 ntBASIC15.65■□□□□ 0.1
NKX2-2O95096 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NKX2-2O95096 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX2-2O95096 AC098831.1-202ENST00000438821 336 ntBASIC15.65■□□□□ 0.1
NKX2-2O95096 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX2-2O95096 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.65■□□□□ 0.1
NKX2-2O95096 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX2-2O95096 AC116407.3-201ENST00000623905 1129 ntBASIC15.65■□□□□ 0.1
NKX2-2O95096 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX2-2O95096 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.65■□□□□ 0.1
NKX2-2O95096 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 AC084018.2-201ENST00000613093 2607 ntBASIC15.64■□□□□ 0.1
NKX2-2O95096 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
NKX2-2O95096 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.1
NKX2-2O95096 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.64■□□□□ 0.09
NKX2-2O95096 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX2-2O95096 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 HLA-A-202ENST00000376806 1854 ntBASIC15.64■□□□□ 0.09
NKX2-2O95096 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX2-2O95096 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX2-2O95096 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 HLA-J-202ENST00000469281 1241 ntBASIC15.64■□□□□ 0.09
NKX2-2O95096 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
NKX2-2O95096 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX2-2O95096 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX2-2O95096 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.64■□□□□ 0.09
NKX2-2O95096 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NKX2-2O95096 OR7E47P-204ENST00000575924 449 ntBASIC15.64■□□□□ 0.09
NKX2-2O95096 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX2-2O95096 AC004790.2-201ENST00000623588 572 ntBASIC15.64■□□□□ 0.09
NKX2-2O95096 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX2-2O95096 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NKX2-2O95096 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 HLA-A-201ENST00000376802 1334 ntBASIC15.64■□□□□ 0.09
NKX2-2O95096 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX2-2O95096 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX2-2O95096 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NKX2-2O95096 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 PKD1P1-201ENST00000458669 6805 ntBASIC15.63■□□□□ 0.09
NKX2-2O95096 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NKX2-2O95096 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NKX2-2O95096 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.63■□□□□ 0.09
NKX2-2O95096 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.63■□□□□ 0.09
NKX2-2O95096 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.63■□□□□ 0.09
NKX2-2O95096 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX2-2O95096 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 AC005412.3-201ENST00000580309 715 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms