Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 AL596325.1-201ENST00000563991 1082 ntBASIC15.28■□□□□ 0.04
CEACAM4O75871 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.28■□□□□ 0.04
CEACAM4O75871 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.28■□□□□ 0.04
CEACAM4O75871 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.28■□□□□ 0.04
CEACAM4O75871 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CEACAM4O75871 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 AC087289.5-201ENST00000586076 3175 ntBASIC15.27■□□□□ 0.04
CEACAM4O75871 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 AC108860.2-201ENST00000562760 2183 ntBASIC15.27■□□□□ 0.04
CEACAM4O75871 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CEACAM4O75871 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CEACAM4O75871 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CEACAM4O75871 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.27■□□□□ 0.04
CEACAM4O75871 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CEACAM4O75871 NME2P1-201ENST00000426182 414 ntBASIC15.27■□□□□ 0.04
CEACAM4O75871 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.27■□□□□ 0.04
CEACAM4O75871 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.27■□□□□ 0.04
CEACAM4O75871 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.27■□□□□ 0.04
CEACAM4O75871 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.27■□□□□ 0.04
CEACAM4O75871 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.27■□□□□ 0.04
CEACAM4O75871 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.27■□□□□ 0.04
CEACAM4O75871 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.27■□□□□ 0.04
CEACAM4O75871 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.27■□□□□ 0.04
CEACAM4O75871 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CEACAM4O75871 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.27■□□□□ 0.03
CEACAM4O75871 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.27■□□□□ 0.03
CEACAM4O75871 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CEACAM4O75871 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM4O75871 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CEACAM4O75871 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM4O75871 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CEACAM4O75871 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.26■□□□□ 0.03
CEACAM4O75871 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.26■□□□□ 0.03
CEACAM4O75871 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.26■□□□□ 0.03
CEACAM4O75871 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.26■□□□□ 0.03
CEACAM4O75871 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.26■□□□□ 0.03
CEACAM4O75871 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.26■□□□□ 0.03
CEACAM4O75871 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM4O75871 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM4O75871 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.26■□□□□ 0.03
CEACAM4O75871 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CEACAM4O75871 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms