Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 HMGA1P7-201ENST00000406908 502 ntBASIC17.29■□□□□ 0.36
CLDN11O75508 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN11O75508 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN11O75508 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN11O75508 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN11O75508 AC010327.4-202ENST00000591484 748 ntBASIC17.29■□□□□ 0.36
CLDN11O75508 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN11O75508 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN11O75508 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN11O75508 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
CLDN11O75508 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN11O75508 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN11O75508 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN11O75508 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN11O75508 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN11O75508 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN11O75508 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CLDN11O75508 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN11O75508 MKNK2P1-201ENST00000437526 628 ntBASIC17.28■□□□□ 0.36
CLDN11O75508 AC140658.5-201ENST00000438532 169 ntBASIC17.28■□□□□ 0.36
CLDN11O75508 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN11O75508 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN11O75508 AC112482.1-201ENST00000492080 688 ntBASIC17.28■□□□□ 0.36
CLDN11O75508 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.28■□□□□ 0.36
CLDN11O75508 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN11O75508 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN11O75508 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 AC013467.2-201ENST00000605472 835 ntBASIC17.28■□□□□ 0.36
CLDN11O75508 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN11O75508 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
CLDN11O75508 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 PCDHB17P-201ENST00000539533 2393 ntBASIC17.28■□□□□ 0.36
CLDN11O75508 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLDN11O75508 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN11O75508 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 AC106820.2-201ENST00000563775 3264 ntBASIC17.27■□□□□ 0.36
CLDN11O75508 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN11O75508 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN11O75508 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLDN11O75508 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN11O75508 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.27■□□□□ 0.36
CLDN11O75508 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN11O75508 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN11O75508 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN11O75508 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.27■□□□□ 0.36
CLDN11O75508 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN11O75508 AC005829.1-201ENST00000570002 483 ntBASIC17.27■□□□□ 0.36
CLDN11O75508 AP002472.1-201ENST00000577490 586 ntBASIC17.27■□□□□ 0.36
CLDN11O75508 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN11O75508 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN11O75508 LINC00895-201ENST00000629028 1637 ntBASIC17.27■□□□□ 0.36
CLDN11O75508 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN11O75508 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN11O75508 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN11O75508 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN11O75508 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN11O75508 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLDN11O75508 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 AC006277.1-201ENST00000624348 1610 ntBASIC17.26■□□□□ 0.35
CLDN11O75508 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms