Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 AL645728.1-201ENST00000366221 2101 ntBASIC12.74□□□□□ -0.37
SH2D1AO60880 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SH2D1AO60880 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 AL049757.1-201ENST00000616842 1596 ntBASIC12.74□□□□□ -0.37
SH2D1AO60880 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 STARP1-201ENST00000397973 869 ntBASIC12.74□□□□□ -0.37
SH2D1AO60880 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 AC122714.2-201ENST00000502787 707 ntBASIC12.74□□□□□ -0.37
SH2D1AO60880 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.74□□□□□ -0.37
SH2D1AO60880 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 AC005332.3-201ENST00000589904 676 ntBASIC12.74□□□□□ -0.37
SH2D1AO60880 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.74□□□□□ -0.37
SH2D1AO60880 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SH2D1AO60880 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 LINC00554-201ENST00000564841 3011 ntBASIC12.74□□□□□ -0.37
SH2D1AO60880 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SH2D1AO60880 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.74□□□□□ -0.37
SH2D1AO60880 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SH2D1AO60880 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.74□□□□□ -0.37
SH2D1AO60880 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.73□□□□□ -0.37
SH2D1AO60880 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.73□□□□□ -0.37
SH2D1AO60880 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 KRT8P10-201ENST00000450021 1447 ntBASIC12.73□□□□□ -0.37
SH2D1AO60880 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.73□□□□□ -0.37
SH2D1AO60880 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.73□□□□□ -0.37
SH2D1AO60880 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SH2D1AO60880 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 AC103564.2-201ENST00000432853 1299 ntBASIC12.73□□□□□ -0.37
SH2D1AO60880 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.73□□□□□ -0.37
SH2D1AO60880 COX11P1-201ENST00000489116 835 ntBASIC12.73□□□□□ -0.37
SH2D1AO60880 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SH2D1AO60880 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 AL390719.2-201ENST00000606993 987 ntBASIC12.73□□□□□ -0.37
SH2D1AO60880 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SH2D1AO60880 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.73□□□□□ -0.37
SH2D1AO60880 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SH2D1AO60880 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SH2D1AO60880 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SH2D1AO60880 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SH2D1AO60880 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SH2D1AO60880 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.72□□□□□ -0.37
SH2D1AO60880 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.72□□□□□ -0.37
SH2D1AO60880 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
SH2D1AO60880 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.72□□□□□ -0.37
SH2D1AO60880 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SH2D1AO60880 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SH2D1AO60880 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SH2D1AO60880 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms