Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.38■□□□□ 0.53
EXTL3O43909 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.38■□□□□ 0.53
EXTL3O43909 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
EXTL3O43909 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
EXTL3O43909 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.38■□□□□ 0.53
EXTL3O43909 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
EXTL3O43909 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.38■□□□□ 0.53
EXTL3O43909 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
EXTL3O43909 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
EXTL3O43909 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
EXTL3O43909 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 RNA5SP416-201ENST00000516838 111 ntBASIC18.37■□□□□ 0.53
EXTL3O43909 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.37■□□□□ 0.53
EXTL3O43909 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 MIR4492-201ENST00000581627 80 ntBASIC18.37■□□□□ 0.53
EXTL3O43909 AC013467.2-201ENST00000605472 835 ntBASIC18.37■□□□□ 0.53
EXTL3O43909 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
EXTL3O43909 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.37■□□□□ 0.53
EXTL3O43909 AC006277.1-201ENST00000624348 1610 ntBASIC18.37■□□□□ 0.53
EXTL3O43909 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
EXTL3O43909 AL645728.1-201ENST00000366221 2101 ntBASIC18.37■□□□□ 0.53
EXTL3O43909 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
EXTL3O43909 AD000864.1-201ENST00000624076 2295 ntBASIC18.37■□□□□ 0.53
EXTL3O43909 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EXTL3O43909 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.36■□□□□ 0.53
EXTL3O43909 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EXTL3O43909 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.36■□□□□ 0.53
EXTL3O43909 AL513480.1-201ENST00000451731 511 ntBASIC18.36■□□□□ 0.53
EXTL3O43909 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
EXTL3O43909 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EXTL3O43909 AC018845.2-201ENST00000568326 409 ntBASIC18.36■□□□□ 0.53
EXTL3O43909 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.36■□□□□ 0.53
EXTL3O43909 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.36■□□□□ 0.53
EXTL3O43909 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 AC131009.4-201ENST00000624048 1740 ntBASIC18.36■□□□□ 0.53
EXTL3O43909 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EXTL3O43909 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.36■□□□□ 0.53
EXTL3O43909 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.35■□□□□ 0.53
EXTL3O43909 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 AL391256.1-201ENST00000443260 1855 ntBASIC18.35■□□□□ 0.53
EXTL3O43909 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms