Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.4■□□□□ 0.22
SLC28A2O43868 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC28A2O43868 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC28A2O43868 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC28A2O43868 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC28A2O43868 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC28A2O43868 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC28A2O43868 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC28A2O43868 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC28A2O43868 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC28A2O43868 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC28A2O43868 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC28A2O43868 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC28A2O43868 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC28A2O43868 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC28A2O43868 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SLC28A2O43868 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC28A2O43868 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 AC016396.2-201ENST00000562575 1417 ntBASIC16.39■□□□□ 0.21
SLC28A2O43868 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC28A2O43868 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC28A2O43868 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC28A2O43868 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC28A2O43868 LAGE3P1-201ENST00000425356 484 ntBASIC16.39■□□□□ 0.21
SLC28A2O43868 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC28A2O43868 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC28A2O43868 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC28A2O43868 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC28A2O43868 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC28A2O43868 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC28A2O43868 C20orf181-201ENST00000623918 480 ntBASIC16.39■□□□□ 0.21
SLC28A2O43868 AC005593.1-201ENST00000624894 515 ntBASIC16.39■□□□□ 0.21
SLC28A2O43868 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC28A2O43868 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SLC28A2O43868 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC28A2O43868 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 GK-202ENST00000378941 458 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC28A2O43868 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 CEND1P1-201ENST00000451006 455 ntBASIC16.38■□□□□ 0.21
SLC28A2O43868 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC28A2O43868 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 AL139327.4-201ENST00000612362 153 ntBASIC16.38■□□□□ 0.21
SLC28A2O43868 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC28A2O43868 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC28A2O43868 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC28A2O43868 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms