Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HDAC3O15379 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC3O15379 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HDAC3O15379 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.56■□□□□ 0.24
HDAC3O15379 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.56■□□□□ 0.24
HDAC3O15379 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC3O15379 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC3O15379 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC3O15379 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.55■□□□□ 0.24
HDAC3O15379 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 AL645929.1-201ENST00000420084 975 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 AC246785.2-201ENST00000432512 513 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 AC092647.4-201ENST00000457211 535 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.55■□□□□ 0.24
HDAC3O15379 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC3O15379 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.55■□□□□ 0.24
HDAC3O15379 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.55■□□□□ 0.24
HDAC3O15379 IGHV3-41-201ENST00000613121 348 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 AC073592.5-201ENST00000624854 528 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.55■□□□□ 0.24
HDAC3O15379 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC3O15379 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC3O15379 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC3O15379 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 PAUPAR-201ENST00000630360 2965 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC3O15379 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC3O15379 FER1L4-210ENST00000615531 5998 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC3O15379 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.55■□□□□ 0.24
HDAC3O15379 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.54■□□□□ 0.24
HDAC3O15379 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.54■□□□□ 0.24
HDAC3O15379 AL021920.2-201ENST00000624828 1351 ntBASIC16.54■□□□□ 0.24
HDAC3O15379 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.54■□□□□ 0.24
HDAC3O15379 AK4P3-201ENST00000418260 669 ntBASIC16.54■□□□□ 0.24
HDAC3O15379 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.54■□□□□ 0.24
HDAC3O15379 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.54■□□□□ 0.24
HDAC3O15379 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 AC011467.2-201ENST00000598425 242 ntBASIC16.54■□□□□ 0.24
HDAC3O15379 AC012306.2-201ENST00000609350 630 ntBASIC16.54■□□□□ 0.24
HDAC3O15379 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HDAC3O15379 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC3O15379 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC3O15379 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC3O15379 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC3O15379 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC3O15379 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC3O15379 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC3O15379 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC3O15379 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HDAC3O15379 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms