Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHL1O00533 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHL1O00533 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHL1O00533 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHL1O00533 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHL1O00533 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.67■■□□□ 1.06
CHL1O00533 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.67■■□□□ 1.06
CHL1O00533 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHL1O00533 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.66■■□□□ 1.06
CHL1O00533 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.66■■□□□ 1.06
CHL1O00533 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CHL1O00533 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHL1O00533 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.66■■□□□ 1.06
CHL1O00533 AC080080.1-201ENST00000625121 2420 ntBASIC21.66■■□□□ 1.06
CHL1O00533 WASH6P-202ENST00000359512 1437 ntBASIC21.66■■□□□ 1.06
CHL1O00533 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.66■■□□□ 1.06
CHL1O00533 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHL1O00533 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.66■■□□□ 1.06
CHL1O00533 AC079140.1-201ENST00000508039 487 ntBASIC21.66■■□□□ 1.06
CHL1O00533 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.66■■□□□ 1.06
CHL1O00533 SNHG9-202ENST00000564014 471 ntBASIC21.66■■□□□ 1.06
CHL1O00533 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CHL1O00533 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.66■■□□□ 1.06
CHL1O00533 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 AC012313.1-201ENST00000593393 3059 ntBASIC21.66■■□□□ 1.06
CHL1O00533 AC026471.1-201ENST00000564629 3026 ntBASIC21.66■■□□□ 1.06
CHL1O00533 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHL1O00533 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.65■■□□□ 1.06
CHL1O00533 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHL1O00533 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CHL1O00533 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.65■■□□□ 1.06
CHL1O00533 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.65■■□□□ 1.06
CHL1O00533 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.65■■□□□ 1.06
CHL1O00533 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.65■■□□□ 1.06
CHL1O00533 AP002490.2-201ENST00000524791 560 ntBASIC21.65■■□□□ 1.06
CHL1O00533 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.65■■□□□ 1.06
CHL1O00533 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CHL1O00533 AC021097.1-201ENST00000607902 574 ntBASIC21.65■■□□□ 1.06
CHL1O00533 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.65■■□□□ 1.06
CHL1O00533 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.65■■□□□ 1.06
CHL1O00533 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 AL512652.2-201ENST00000625156 1716 ntBASIC21.65■■□□□ 1.06
CHL1O00533 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.65■■□□□ 1.06
CHL1O00533 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHL1O00533 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHL1O00533 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHL1O00533 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.64■■□□□ 1.06
CHL1O00533 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.64■■□□□ 1.06
CHL1O00533 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHL1O00533 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.64■■□□□ 1.06
CHL1O00533 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHL1O00533 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.64■■□□□ 1.06
CHL1O00533 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHL1O00533 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
CHL1O00533 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.64■■□□□ 1.05
CHL1O00533 TIMM8BP1-201ENST00000452384 211 ntBASIC21.64■■□□□ 1.05
CHL1O00533 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.64■■□□□ 1.05
CHL1O00533 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CHL1O00533 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.64■■□□□ 1.05
CHL1O00533 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.64■■□□□ 1.05
CHL1O00533 AC004835.2-201ENST00000603762 682 ntBASIC21.64■■□□□ 1.05
CHL1O00533 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CHL1O00533 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.64■■□□□ 1.05
CHL1O00533 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CHL1O00533 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHL1O00533 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CHL1O00533 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.64■■□□□ 1.05
CHL1O00533 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.64■■□□□ 1.05
CHL1O00533 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms