Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C4orf47A7E2U8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 HILS1-202ENST00000545329 423 ntBASIC16.54■□□□□ 0.24
C4orf47A7E2U8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.54■□□□□ 0.24
C4orf47A7E2U8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.53■□□□□ 0.24
C4orf47A7E2U8 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.53■□□□□ 0.24
C4orf47A7E2U8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 AC005412.3-201ENST00000580309 715 ntBASIC16.53■□□□□ 0.24
C4orf47A7E2U8 REXO1L9P-201ENST00000604264 2108 ntBASIC16.53■□□□□ 0.24
C4orf47A7E2U8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
C4orf47A7E2U8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C4orf47A7E2U8 MIR346-201ENST00000362234 95 ntBASIC16.52■□□□□ 0.24
C4orf47A7E2U8 AC245100.3-201ENST00000441281 285 ntBASIC16.52■□□□□ 0.24
C4orf47A7E2U8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms