Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.64■□□□□ 0.41
SRRM3A6NNA2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM3A6NNA2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 YBX2P1-201ENST00000394192 760 ntBASIC17.63■□□□□ 0.41
SRRM3A6NNA2 AL035633.1-201ENST00000406139 838 ntBASIC17.63■□□□□ 0.41
SRRM3A6NNA2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 FAM8A3P-201ENST00000427218 844 ntBASIC17.63■□□□□ 0.41
SRRM3A6NNA2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 AC005332.3-201ENST00000589904 676 ntBASIC17.63■□□□□ 0.41
SRRM3A6NNA2 FAM197Y3-203ENST00000618346 717 ntBASIC17.63■□□□□ 0.41
SRRM3A6NNA2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM3A6NNA2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 AC092384.3-202ENST00000564646 2873 ntBASIC17.62■□□□□ 0.41
SRRM3A6NNA2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 MED15P5-201ENST00000423150 992 ntBASIC17.62■□□□□ 0.41
SRRM3A6NNA2 DNAJB3-201ENST00000446806 729 ntBASIC17.62■□□□□ 0.41
SRRM3A6NNA2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 AC116407.3-201ENST00000623905 1129 ntBASIC17.62■□□□□ 0.41
SRRM3A6NNA2 AC009949.1-201ENST00000623048 1830 ntBASIC17.62■□□□□ 0.41
SRRM3A6NNA2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM3A6NNA2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms