Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT2A6NDA9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 LINC00895-201ENST00000629028 1637 ntBASIC16.12■□□□□ 0.17
LRIT2A6NDA9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 Z83851.2-201ENST00000609564 659 ntBASIC16.12■□□□□ 0.17
LRIT2A6NDA9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 IL9RP2-201ENST00000423948 1312 ntBASIC16.12■□□□□ 0.17
LRIT2A6NDA9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT2A6NDA9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 AL590627.1-203ENST00000421194 1026 ntBASIC16.11■□□□□ 0.17
LRIT2A6NDA9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 AC145285.3-201ENST00000564603 959 ntBASIC16.11■□□□□ 0.17
LRIT2A6NDA9 MIR4751-201ENST00000578027 74 ntBASIC16.11■□□□□ 0.17
LRIT2A6NDA9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 MPDU1-223ENST00000582151 728 ntBASIC16.11■□□□□ 0.17
LRIT2A6NDA9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 BX640515.1-201ENST00000617215 977 ntBASIC16.11■□□□□ 0.17
LRIT2A6NDA9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 AL391256.1-201ENST00000443260 1855 ntBASIC16.11■□□□□ 0.17
LRIT2A6NDA9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT2A6NDA9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 FLJ38576-201ENST00000623820 2459 ntBASIC16.1■□□□□ 0.17
LRIT2A6NDA9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT2A6NDA9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms